Fix formatting and clippy warnings across workspace

- Run cargo fmt on all crates
- Fix regex patterns using unsupported lookahead in patterns.rs
- Replace unwrap() calls with compile_regex() helper
- Fix never type fallback in GitHub tracker
- Fix redundant field name in findings page
- Allow enum_variant_names for Dioxus Route enum
- Fix &mut Vec -> &mut [T] clippy lint in sbom.rs
- Mark unused-but-intended APIs with #[allow(dead_code)]

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

compliance-agent/src/api/handlers/mod.rs

@@ -19,8 +19,12 @@ pub struct PaginationParams {
     pub limit: i64,
 }
 
-fn default_page() -> u64 { 1 }
-fn default_limit() -> i64 { 50 }
+fn default_page() -> u64 {
+    1
+}
+fn default_limit() -> i64 {
+    50
+}
 
 #[derive(Deserialize)]
 pub struct FindingsFilter {
@@ -73,7 +77,9 @@ pub struct AddRepositoryRequest {
     pub scan_schedule: Option<String>,
 }
 
-fn default_branch() -> String { "main".to_string() }
+fn default_branch() -> String {
+    "main".to_string()
+}
 
 #[derive(Deserialize)]
 pub struct UpdateStatusRequest {
@@ -90,15 +96,43 @@ pub async fn health() -> Json<serde_json::Value> {
 pub async fn stats_overview(Extension(agent): AgentExt) -> ApiResult<OverviewStats> {
     let db = &agent.db;
 
-    let total_repositories = db.repositories().count_documents(doc! {}).await.unwrap_or(0);
+    let total_repositories = db
+        .repositories()
+        .count_documents(doc! {})
+        .await
+        .unwrap_or(0);
     let total_findings = db.findings().count_documents(doc! {}).await.unwrap_or(0);
-    let critical_findings = db.findings().count_documents(doc! { "severity": "critical" }).await.unwrap_or(0);
-    let high_findings = db.findings().count_documents(doc! { "severity": "high" }).await.unwrap_or(0);
-    let medium_findings = db.findings().count_documents(doc! { "severity": "medium" }).await.unwrap_or(0);
-    let low_findings = db.findings().count_documents(doc! { "severity": "low" }).await.unwrap_or(0);
-    let total_sbom_entries = db.sbom_entries().count_documents(doc! {}).await.unwrap_or(0);
+    let critical_findings = db
+        .findings()
+        .count_documents(doc! { "severity": "critical" })
+        .await
+        .unwrap_or(0);
+    let high_findings = db
+        .findings()
+        .count_documents(doc! { "severity": "high" })
+        .await
+        .unwrap_or(0);
+    let medium_findings = db
+        .findings()
+        .count_documents(doc! { "severity": "medium" })
+        .await
+        .unwrap_or(0);
+    let low_findings = db
+        .findings()
+        .count_documents(doc! { "severity": "low" })
+        .await
+        .unwrap_or(0);
+    let total_sbom_entries = db
+        .sbom_entries()
+        .count_documents(doc! {})
+        .await
+        .unwrap_or(0);
     let total_cve_alerts = db.cve_alerts().count_documents(doc! {}).await.unwrap_or(0);
-    let total_issues = db.tracker_issues().count_documents(doc! {}).await.unwrap_or(0);
+    let total_issues = db
+        .tracker_issues()
+        .count_documents(doc! {})
+        .await
+        .unwrap_or(0);
 
     let recent_scans: Vec<ScanRun> = match db
         .scan_runs()
@@ -135,9 +169,19 @@ pub async fn list_repositories(
 ) -> ApiResult<Vec<TrackedRepository>> {
     let db = &agent.db;
     let skip = (params.page.saturating_sub(1)) * params.limit as u64;
-    let total = db.repositories().count_documents(doc! {}).await.unwrap_or(0);
+    let total = db
+        .repositories()
+        .count_documents(doc! {})
+        .await
+        .unwrap_or(0);
 
-    let repos = match db.repositories().find(doc! {}).skip(skip).limit(params.limit).await {
+    let repos = match db
+        .repositories()
+        .find(doc! {})
+        .skip(skip)
+        .limit(params.limit)
+        .await
+    {
         Ok(cursor) => collect_cursor_async(cursor).await,
         Err(_) => Vec::new(),
     };
@@ -208,9 +252,20 @@ pub async fn list_findings(
     }
 
     let skip = (filter.page.saturating_sub(1)) * filter.limit as u64;
-    let total = db.findings().count_documents(query.clone()).await.unwrap_or(0);
+    let total = db
+        .findings()
+        .count_documents(query.clone())
+        .await
+        .unwrap_or(0);
 
-    let findings = match db.findings().find(query).sort(doc! { "created_at": -1 }).skip(skip).limit(filter.limit).await {
+    let findings = match db
+        .findings()
+        .find(query)
+        .sort(doc! { "created_at": -1 })
+        .skip(skip)
+        .limit(filter.limit)
+        .await
+    {
         Ok(cursor) => collect_cursor_async(cursor).await,
         Err(_) => Vec::new(),
     };
@@ -268,9 +323,19 @@ pub async fn list_sbom(
 ) -> ApiResult<Vec<SbomEntry>> {
     let db = &agent.db;
     let skip = (params.page.saturating_sub(1)) * params.limit as u64;
-    let total = db.sbom_entries().count_documents(doc! {}).await.unwrap_or(0);
+    let total = db
+        .sbom_entries()
+        .count_documents(doc! {})
+        .await
+        .unwrap_or(0);
 
-    let entries = match db.sbom_entries().find(doc! {}).skip(skip).limit(params.limit).await {
+    let entries = match db
+        .sbom_entries()
+        .find(doc! {})
+        .skip(skip)
+        .limit(params.limit)
+        .await
+    {
         Ok(cursor) => collect_cursor_async(cursor).await,
         Err(_) => Vec::new(),
     };
@@ -288,9 +353,20 @@ pub async fn list_issues(
 ) -> ApiResult<Vec<TrackerIssue>> {
     let db = &agent.db;
     let skip = (params.page.saturating_sub(1)) * params.limit as u64;
-    let total = db.tracker_issues().count_documents(doc! {}).await.unwrap_or(0);
+    let total = db
+        .tracker_issues()
+        .count_documents(doc! {})
+        .await
+        .unwrap_or(0);
 
-    let issues = match db.tracker_issues().find(doc! {}).sort(doc! { "created_at": -1 }).skip(skip).limit(params.limit).await {
+    let issues = match db
+        .tracker_issues()
+        .find(doc! {})
+        .sort(doc! { "created_at": -1 })
+        .skip(skip)
+        .limit(params.limit)
+        .await
+    {
         Ok(cursor) => collect_cursor_async(cursor).await,
         Err(_) => Vec::new(),
     };
@@ -310,7 +386,14 @@ pub async fn list_scan_runs(
     let skip = (params.page.saturating_sub(1)) * params.limit as u64;
     let total = db.scan_runs().count_documents(doc! {}).await.unwrap_or(0);
 
-    let scans = match db.scan_runs().find(doc! {}).sort(doc! { "started_at": -1 }).skip(skip).limit(params.limit).await {
+    let scans = match db
+        .scan_runs()
+        .find(doc! {})
+        .sort(doc! { "started_at": -1 })
+        .skip(skip)
+        .limit(params.limit)
+        .await
+    {
         Ok(cursor) => collect_cursor_async(cursor).await,
         Err(_) => Vec::new(),
     };